秦源，女，博士，博士生导师，福建农林大学生命科学学院院长，福建省引进高层次B类人才，2020年度福建省自然科学奖二等奖（第1完成人）， “国家优秀青年科学基金”获得者，中英人才项目“牛顿高级学者基金”获得者，福建省“百人计划”，福建省高校领军人才，福建省“闽江学者”特聘教授，广西壮族自治区特聘专家，获福建青年科技奖，福建运盛青年科技奖，福建青年五四奖章，福建省“向上向善育人工程基金”奖教金，带队获得全国博士后创新创业大赛铜奖。2001年获得武汉大学药学学士学位，2006年获得武汉大学发育生物学博士学位，2006-2009年在美国亚利桑那大学植物系进行博士后研究，2009-2014年任职于中国科学院上海生命科学研究院植物生理生态研究所副研究员，2014年至今任福建农林大学教授。先后主持“国家自然科学国际合作项目”、“国家自然科学基金海峡联合基金重点项目”、“国家自然科学优秀青年科学基金项目”、“国家自然科学基金面上项目”等国家省部级项目十多项。在植物生殖发育领域有系统的研究，发表书籍（章节）3本，发明专利5项，相关论文80余篇，其中以第一作者或（并列）通讯作者身份在国际期刊PNAS, Current Biology, Plant Cell, Molecular Plant, New Phytologist, PLoS Genetics, Plant Physiology, Plant Journal等发表SCI收录论文60余篇。任《热带生物学报》副主编，《Communications Biology》, 《Tropical Plant Biology》，《亚热带植物科学》编委,中国植物学会细胞生物学专业委员会委员，国家自然科学基金二审专家、国家“青年千人”计划会评专家、广西科学技术奖会评专家，福建省遗传学会青年委员会主任等。培养研究生获得省优秀博士学位论文3篇和省优秀硕士学位论文1篇。
联系方式：yuanqin001@foxmail.com
研究领域：
1.植物雌配子体发育的分子机理。
2.植物逆境发育的分子调控。
发表论文：
一、通讯作者论文
50. Cai H, Zhang M, Chai M, He Q, Huang X, Zhao L, Qin Y*. (2019) Epigenetic Regulation of Anthocyanin Biosynthesis by an Antagonistic Interaction between H2A.Z and H3K4me3. New Phytologist. 221(1):295-308.(IF=7.3) 他引6
49. Cheng Y, Yang P, Zhao L, Priyadarshani SVGN, Zhou Q, Li Z, Li W, Xiong J, Lin Z, Li L, Huang X, Liu J, Aslam M, Zhao H, Li G, Ma J, Li L, Qin Y*. (2019) Studies on genome size estimation, chromosome number, gametophyte development and plant morphology of salt-tolerant halophyte Suaeda salsa. BMC Plant Biology. 19: 473-485
48. Priyadarshani SVGN, Cai H, Zhou Q, Liu Y, Cheng Y, Xiong J, Patson DL, Cao S, Zhao H, Qin Y*. (2019) An Efficient Agrobacterium Mediated Transformation of Pineapple with GFP-Tagged Protein Allows Easy, Non-Destructive Screening of Transgenic Pineapple Plants. Biomolecules. 9, 617. doi: 10.3390/biom9100617.
47. Aslam M*, Fakher B, Jakada B, Zhao L, Cao S, Cheng Y, Qin Y*. (2019) Genome-Wide Identification and Expression Profiling of CBL-CIPK Gene Family in Pineapple (Ananas comosus) and the Role of AcCBL1 in Abiotic and Biotic Stress Response. Biomolecules. 9, 293; doi:10.3390/biom9070293
46. Jakada B, Aslam M*, Fakher B, Greaves J, Li Z, Li W, Lai L, Ayoade O, Cheng Y, Cao S, Li G, Hu J， Qin Y*. (2019) Identification of SWI2/SNF2-Related 1 Chromatin Remodeling Complex (SWR1-C) Subunits in Pineapple and the Role of Pineapple SWR1 COMPLEX 6 (AcSWC6) in Biotic and Abiotic Stress Response. Biomolecules. 9,364; doi:10.3390/biom9080364 (IF=4.694)
45. Bai Y, Dai X, Li Y, Wang L, Li W, Liu Y, Cheng Y, Qin Y*. (2019) Identification and characterization of pineapple leaf lncRNAs in crassulacean acid metabolism (CAM) photosynthesis pathway. Scientific Reports. 9:6658-6669
44. Aslam M, Fakher B, Anandhan S, Pande V, Ahmed Z, Qin Y*. (2019) Ectopic Expression of Cold Responsive LlaCIPK Gene Enhances Cold Stress Tolerance in Nicotiana tabacum. Genes. 10, 446; doi:10.3390/genes10060446
43. Cao S, Cheng H, Zhang J, Aslam M, Yan M, Hu A, Lin L, Ojolo S, Zhao H, Priyadarshani S, Yu Y*, Cao G*, Qin Y*. (2019) Genome-wide identification, expression pattern analysis and evolution of the Ces/Csl gene superfamily in Pineapple (Ananas comosus). Plants. 8, 275; doi:10.3390/plants8080275
42. Cai H, Zhang M, Liu Y, He Q, Chai M, Liu L, Chen F, Huang Y, Yan M, Zhao H,J.-M. Hu, Qin Y*. (2019) Genome-wide classification and evolutionary and functional analyses of the VQ family. Tropical Plant Biology. https://doi.org/10.1007/s12042-019-09224-4
41. Li Z, Su Z, Qin Y*. (2019) Genome-wide identification, Characterization of RDR genes and their expression analysis during reproductive development and stress in Pineapple. Tropical Plant Biology. DOI: 10.1007/s12042-019-09241-3
40. Chen H, Hu B, Zhao L, Shi D, She Z, Huang X, Priyadarshani S, Niu X*, Qin Y*. (2019) Differential Expression Analysis of Reference Genes in Pineapple (Ananas comosus L.) during Reproductive Development and Response to Abiotic Stress, Hormonal Stimuli. Tropical Plant Biology. https://doi.org/10.1007/s12042-019-09218-2
39. Zhao L, Cai H, Su Z, Wang L, Huang X, Zhang M, Chen P, Dai X, Zhao H, Palanivelu R, Chen X*, Qin Y*. (2018) KLU Suppresses Megasporocyte Cell Fate through SWR1-Mediated Activation of WRKY28 Expression in Arabidopsis. Proceedings of the National Academy of Sciences. 115(3): 526-535. (IF=9.4) 他引13
38. Priyadarshani S, Hu B, Li W, Ali H, Jia H, Zhao L, Ojolo S, Azam S, Xiong J, Yan M, Rahman Z, Wu Q*, Qin Y*. (2018) Simple protoplast isolation system for gene expression and protein interaction studies in pineapple (Ananas comosus L.). Plant Methods. 14: 95-107 (IF=4.3) 他引3
37. Ojolo S, Cao S, Priyadarshani S, Li W, Yan M, Zhao H, Qin Y*. (2018) Plant growth and development regulation: A review from chromatin remodeling perspective. Frontiers in Plant Science. 9:1232-1245 (IF=3.7) 他引3
36. Zhang M, Liu Y, Shi H, Guo M, Chai M, He Q, Yan M, Cao D, Zhao L, Cai H*, Qin Y*. (2018) Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family. BMC Genomics 19:159-173. (IF=3.7) 他引5
35. Li W, Yan M, Hu B, Priyadarshani S, Hou Z, Ojolo S, Xiong J, Zhao H, Qin Y*. (2018) Characterization and the Expression Analysis of Nitrate Transporter (NRT) Gene Family in Pineapple. Tropical Plant Biology. https://doi.org/10.1007/s12042-018-9209-z (IF=1.4) 他引1
34. Azam S, Liu Y, Rahman Z, Ali H,Qin Y*. (2018) Identification, characterization and expression profiles of Dof transcription factors in pineapple (Ananas comosus L). Tropical Plant Biology. https://doi.org/10.1007/s12042-018-9200-8(IF=1.4) 他引1
33. Su Z, Zhao L, Zhao Y, Li S, Won S, Cai H, Wang L, Li Z, Chen P, Qin Y*, Chen X*. (2017) The THO complex non-cell autonomously represses female germline specification through the TAS3-ARF3 module. Current Biology 27(11):1597-1609. (IF=8.9) 他引12
32. Dai X, Bai Y, Zhao L, Dou X, Liu Y, Wang L, Li Y, Li W, Hui Y, Huang X, Wang Z*, Qin Y*. (2017) H2A.Z represses gene expression by modulating promoter nucleosome structure and enhancer histone modifications inArabidopsis. Molecular Plant. 10: 1274-1292.(IF=9.3，被评为年度12篇最佳论文之一) 他引28
31. Cai H, Zhao L, Wang L, Zhang M, Su Z, Cheng Y, Zhao H, Qin Y*. (2017) ERECTA signaling controls Arabidopsis inflorescence architecture through chromatin-mediated activation of PRE1 expression. New Phytologist 214(4):1579-1596 (IF=7.3) 他引14
30. Chen P, Li Y, Zhao L, Hou Z, Yan M, Hu B, Liu Y, Azam S, Zhang Z, Rahman Z, Liu L, Qin Y*. (2017) Genome-wide identification and expression profiling of ATP-binding cassette (ABC) transporter gene family in pineapple (Ananas comosus (L.) Merr.) reveal the role of AcABCG38 in pollen development. Frontiers in Plant Science. 8: 2150-2164. (IF=4.3) 他引7
29. Ali H, Liu Y, Azam S, Rahman Z, Priyadarshani S, Li W, Huang X, Hu B, Xiong J, Ali U, Qin Y*. (2017) Genomic survey, characterization and expression profile analysis of the SBP genes in pineapple (Ananas comosus L.). International Journal of Genomics. Article ID 1032846, doi:10.1155/2017/1032846. (IF=2.6) 他引4
28. Rahman Z, Azam S, Liu Y, Yan C, Ali H, Zhao L,Chen P, Li Y, Priyadarshani S, Qin Y*. (2017) Expression profiles of Wuschel-Related Homeobox gene family in pineapple (Ananas comosus L). Tropical Plant Biology. 10:204-215 (IF=1.4) 他引3
27. Su Z, Wang L, Li W, Zhao L, Huang X, Azam S, Qin Y*. (2017) Genome-Wide Identification of Auxin Response Factor (ARF) Genes Family and its Tissue-Specific Prominent Expression in Pineapple (Ananas comosus). Tropical Plant Biology. 10(2-3):86-96 (封面论文, IF=1.4) 他引8
26. 王路路, 秦源*. (2017) 植物雌配子体发育的分子调控. 生命科学29(3):310-318. （核心期刊CSCD-C）
25. Lihua Zhao, Jiangman He, Hanyang Cai, Haiyan Lin, Renyi Liu, Zhenbiao Yang, Yuan Qin*. (2014)Comparative expression profiling reveals novel gene functions in female meiosis and gametophyte development in Arabidopsis. Plant Journal. 80(4):615-28. (IF=6. 8) 他引22
24. 常小艳, 赵丽华, 付凤玲*, 秦源*. (2014) 拟南芥温度诱导脂质运载蛋白TIL1参与雌配子体发育. 植物生理学报, 50 (3): 253~262 （封面论文，权威期刊CSCD-C）
二、第一作者论文
23. Qin Y, Zhao L, Skaggs M, Andreuzza S, Tsukamoto T, Panoli A, Wallace K, Smith S, Siddiqi I, Yang Z, Yadegari R* and Palanivelu R*. (2014)ACTIN-RELATED PROTEIN6 Regulates Female Meiosis By Modulating Meiotic Gene Expression in Arabidopsis. Plant Cell. 26:1612-1628. (IF=9.25) 他引37
22. Yuan Qin and Juan Dong*. (2015) Focusing on the focus: what else beyond the master switches for polar cell growth? Molecular Plant. 8: 582–594 (IF=6.6)
21. Qin Y, Leydon AR, Manziello A, Pandey R, Mount D, Denic S, Vasic B, Johnson MA and Palanivelu R*. (2009). Penetration of the stigma and style elicits a novel transcriptome in pollen tubes identifying genes critical for growth in a pistil. PLoS Genetics, 5 (8): e1000621.doi:10.1371/journal.pgen.1000621.(封面论文) (IF=8.5) 他引257
20. Yuan Qin, Wysocki Jr RJ, Somogyi A, Feinstein Y, Franco JY, Tsukamoto T, Dunatunga D, Levy C, Smith S, Simpson R, Gang D, Johnson MA and Ravishankar Palanivelu*. (2011) Sulfinylated Azadecalins act as functional mimics of the pollen germination stimulant in Arabidopsis pistils. Plant Journal68 (5) 800-815. (IF=6. 8)他引22
19. Yuan Qin, Zhenbiao Yang*. (2011) Rapid tip growth: Insights from pollen tubes. Seminars in Cell and Developmental Biology 22(8):816-24. (IF=6.2) 他引105
18. Yuan Qin and Jie Zhao* (2006). Localization of arabinogalactan-proteins in egg cells, zygotes and two-celled proembryos and effects of β-D-glucosyl Yariv reagent on egg cell fertilization and zygote division in Nicotiana tabacum L. Journal of experimental botany 57(9): 2061-74. (IF=5.2) 他引66
17. Yuan Qin, Ramin Yadegari,and Ravishankar Palanivelu*. (2015) ACTIN-RELATED PROTEIN 6 regulates DISRUPTED MEIOTIC cDNA 1 gene expression in Arabidopsis thaliana ovules.Molecular Reproduction and Development. 82 (7-8): 499(IF=2.5)
16. Yuan Qin and Jie Zhao* (2007). Localization of arabinogalactan-proteins in different stages of embryos and their role in cotyledon formation of Nicotiana tabacum L. Sexual Plant Reproduction 20(4): 213 – 224. (IF=2.07) 他引16
15. Yuan Qin, Dan Chen, Jie Zhao* (2007). Localization of arabinogalactan proteins in anther, pollen, and pollen tube of Nicotiana tabacum L. Protoplasma 231(1-2):43-53. (IF=2.85) 他引45
14. 秦源，陈丹，赵洁（2006）。烟草柱头和花柱组织中阿拉伯半乳糖蛋白的定位。植物生理与分子生物学学报。32(3): 307-14.
13. Yuan Qin, Jun Yang, Jie Zhao (2005).Calcium changes and the response to methyl jasmonate in rice lodicules during anthesis. Protoplasma225(1-2): 103–112. (IF=2.855) 他引17
12.秦源，赵洁（2004）。阿拉伯半乳糖蛋白在被子植物有性生殖过程中的作用。植物生理与分子生物学学报。30(4): 371-378.
三、非通讯非第一作者论文
11. Yang Y, Chen B, Dang X, Zhu L, Rao j, Ren H, Lin C, Qin Y, Lin D* (2019). Arabidopsis IPGA1 is a microtubule-associated protein essential for cell expansion during petal morphogenesis. Journal of Experimental Botany. 70(19)，5231-5243.
10. Hui Li, Nan Luo, Weidong Wang, Zengyu Liu, Jisheng Chen, Liangtao Zhao, Li Tan, Chunyan Wang, Yuan Qin, Chao Li, Tongda Xu, and Zhenbiao Yang* (2018). The REN4 rheostat dynamically coordinates the apical and lateral domains of Arabidopsis pollen tubes. Nature Communications. 9(1): 2573 (IF=12.3) 他引2
9. Cao L, Wang S, Venglat P, Zhao L, Cheng Y, Ye S, Qin Y, Datla R, Zhou Y*, Wang H*. (2018). Arabidopsis ICK/KRP cyclin-dependent kinase inhibitors function to ensure the formation of one megaspore mother cell and one functional megaspore per ovule. PLoS Genetics 14(3): e100723 (IF=5.5) 他引3
8. Fei Chen, Yue Hu, Alessandro Vannozzi, Kangcheng Wu, Hanyang Cai, Yuan Qin, Alison Mullis, Zhenguo Lin, Liangsheng Zhang (2018). The WRKY Transcription Factor Family in Model Plants and Crops. Critical Reviews in Plant Sciences, DOI:10.1080/07352689.2018. 1441103 (IF=6.1) 他引11
7. Ming R, VanBuren R, Wai CM, Tang H, Schatz MC, Bowers JE, Lyons E, Wang ML, Chen J, Biggers E, Zhang J, Huang L, Zhang L, Miao W, Zhang J, Ye Z, Miao C, Lin Z, Wang H, Zhou H, Yim WC, Priest HD, Zheng C, Woodhouse M, Edger PP, Guyot R, Guo HB, Guo H, Zheng G, Singh R, Sharma A, Min X, Zheng Y, Lee H, Gurtowski J, Sedlazeck FJ, Harkess A, McKain MR, Liao Z, Fang J, Liu J, Zhang X, Zhang Q, Hu W, Qin Y, Wang K, Chen LY, Shirley N, Lin YR, Liu LY, Hernandez AG, Wright CL, Bulone V, Tuskan GA, Heath K, Zee F, Moore PH, Sunkar R, Leebens-Mack JH, Mockler T, Bennetzen JL, Freeling M, Sankoff D, Paterson AH, Zhu X, Yang X, Smith JA, Cushman JC, Paull RE, Yu Q. (2015) The pineapple genome and the evolution of CAM photosynthesis.Nature Genetics. 47(12):1435-42. (IF=29) 他引168
6. Leydon, A. R., Tsukamoto, T., Dunatunga, D., Qin, Y., Johnson, M. A., and Palanivelu, R*. (2015). Pollen tube discharge completes the process of synergid degeneration that is initiated by pollen tube – synergid interaction in Arabidopsis. Plant Physiology 169: 485-496. (IF=6.28)
5. Yetisen, A.K., Jiang, L., Cooper, J.R., Qin, Y., Palanivelu, R. & and Zohar, Y. (2011) A microsystem-based assay for studying pollen tube guidance in plant reproduction. Journal of Micromechanics and Microengineering 21: 054018. (IF=1.79) 他引16
4. Tatsuya Tsukamoto, Yuan Qin, Yiding Huang, Damayanthi Dunatunga and Ravishankar Palanivelu. (2010) A role for LORELEI, a putative glycosylphosphatidylinositol-anchored protein, in Arabidopsis thaliana double fertilization and early seed development. Plant Journal 62(4):571-88. (IF=5.468) 他引77
3. Juanzi Wu, Yuan Qin, Jie Zhao* (2008). Pollen tube growth is affected by exogenous hormones and correlated with hormone changes in styles in Torenia fournieri L.Plant Growth Regulation 55(2):137-148. (IF=2.57) 他引26
2. Ying Hu, Yuan Qin, Jie Zhao (2006). Localization of arabinogalactan-proteins epitope and the effects of Yariv phonylglycoside during zygotic embryo development of Arabidopsis thaliana. Protoplasma229(1): 21-31. (IF=2.343) 他引34
1. 赵振东，秦源，吴娟子，赵洁（2006）。在烟草和蓝猪耳花粉萌发及花粉管生长中阿拉伯半乳糖蛋白的作用。武汉植物学研究。24(5): 397-402.
项目：
申请人主持或参加科研项目（课题）及人才计划项目情况
13. 国家自然科学基金面上项目，31970333，拟南芥MADS-box转录因子AGLs调控珠被和雌配子体协同发育，2020/1-2023/12，58.00万元，在研，主持。
12. 国家自然科学基金委员会与英国皇家学会联合资助的中英人才项目牛顿高级学者基金，31761130074，染色质重塑复合物SWR1通过调节miR398表达调控胚珠发育研究，2017/3-2020/2，11万英镑+42万人民币，在研，主持。
11. 国家自然科学基金海峡联合基金重点项目，U1605212，菠萝雌配子体发育及演化研究，2017/1-2020/12，216万，在研，主持。
10. 国家自然科学优秀青年科学基金，31522009，植物雌性生殖系细胞的形成和分化，2016/1-2018/12，150万，已结题，主持。
9. 福建省百人计划，660160050，植物生殖发育机理研究， 2017/1-2019/12，100万，在研，主持。
8. 福建省高校领军人才，植物雌配子体发育研究，2018/1-2020/12，70万，在研，主持。
7. 国家自然科学基金面上项目，31470284，拟南芥三个转录因子STF1/2/3介导体细胞调控雌配子体发育的分子机理，2015/1-2018/12，85万，已结题，主持。
6. 福建省教育厅新世纪人才项目，JA14096，染色质重塑复合物SWR1调控花瓣发育的分子机理，2014/8-2016/7，5万，已结题，主持。
5. 杂交水稻国家重点实验室（武汉大学）开放课题，KF201306，水稻柱头与花粉识别机理的蛋白质组学研究，2013/1-2013/12，5万，已结题，主持。
4. 国家自然科学基金面上项目，31170290，拟南芥染色质重组复合物SWR1成员ARP6调控植物大孢子发生的分子机理及信号网络研究，2012/1-2015/12，65万，已结题，主持。
3. 国家重大科学研究发展计划子课题，2011CB944600，植物减数分裂过程中染色体相互作用的分子机理，2011/1-2015/8，91万，已结题，主持。
2. 国家重点基础研究发展计划子课题，2012CB944800，植物胚乳发育及储藏物质累积的分子调控机制研究，2012/1-2016/8，90万，已结题，主持。
1. 中科院创新工程青年创新促进会项目，Y119Z61B11，雌配子体发育的基因网络，2011/1-2014/12，40万，已结题，主持。
著作：
1. 《植物生理与分子生物学》（第四版）第二篇，第八章 细胞极性; 第十章 植物内膜系统的发育及运输 菅新宇，秦源，杨贞标； 李晖，秦源，杨贞标。高等教育出版社，2012年6月印刷。ISBN 978-7-04-035155-2
2. 中国科学技术协会主编 《2012-2013植物生物学学科发展报告》 综合报告 四、植物生物学科发展趋势及展望 杨贞标 秦源。 中国科学技术出版社， 2014年4月印刷。ISBN 978-7-5046-6549-2/Q.181
3. 《Genetics and Genomics of Pineapple》, Chapter 2, Biology of the Pineapple Plant; Chapter 4, Genetic Diversity of Pineapple, Cheng Yan, Duane Bartholomew, Heming Zhao and Yuan Qin. Springer September, 2018. ISBN 978-3-030-00613-6
专利：
5.Qin, Y., Palanivelu, R., Wysocki, R.Y., Somogyi, A., and Feinstein, Y. Pollen tube stimulants from Arabidopsis pistils. U.S. patent (#: 8,389,728) was awarded to the Board of Regents, University of Arizona (on March 5, 2013).
4.秦源，蔡汉阳，张曼，赵丽华，王路路。快速观察拟南芥胚珠形态及统计外珠被细胞数目的方法。发明专利，授权公告号CN106950088B，申请公布日 2019.06.04
3.秦源，蔡汉阳，张曼，何晴，柴梦楠，赵丽华。一种菠萝AcWRKY28基因及其超表达载体的构建和应用。发明专利，申请公布号CN 108048470 A，申请公布日 2018.05.18
2.秦源，赵丽华，蔡汉阳，侯志敏，张曼，陈票娟。一种菠萝染色体二级结构的样品制备方法。发明专利，申请公布号CN 108611345 A，申请公布日 2018.10.02
1.赵丽华，秦源，侯志敏，刘丽萍，蔡汉阳，王路路。利用免疫组化法检测菠萝胚珠减数分裂蛋白分布的方法。发明专利，申请公布号CN 108318697 A，申请公布日 2018.07.24
