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张兴坦教授
发布时间 :2019-10-09    浏览:235



张兴坦,教授、硕士生导师。2009年于哈尔滨工业大学本科毕业,2015年于重庆大学获得植物学博士学位。张兴坦博士长期致力于植物功能基因组学研究,研究领域包括复杂基因组的组装和分型、生物信息分析技术的开发、基于组学大数据挖掘重要功能基因等。研究成果以第一或通讯作者(含共同)在Cell, Nature, Nature Genetics, Nature Plants, Nature Communications等高水平期刊发表。


主要研究方向:植物基因组学和功能基因组学、生物信息学


电子邮箱:zhangxt@fafu.edu.cn


学习经历:

2013.10-2014.10   美国J.Craig Venter Institute访问博士生

2009.07-2015.06   重庆大学,植物学博士

2005.10-2009.10   哈尔滨工业大学,生物工程学士


发表论文:

1. Zhang Xingtan#, Gang Wang#, Shengcheng Zhang, Shuai Chen et al., 2020. “Genomes of banyan fig and pollinator wasp provide insights into fig-wasp coevolution.” Cell 183 (4): 875-889.https://doi.org/10.1016/j.cell.2020.09.043

2. Zhang Xingtan, Shengcheng Zhang, Qian Zhao, Ray Ming, and Haibao Tang*. 2019. “Assembly of Allele-Aware, Chromosomal-Scale Autopolyploid Genomes Based on Hi-C Data.” Nature Plants 5 (8): 833–45. https://doi.org/10.1038/s41477-019-0487-8.

3. Zhang, Liangsheng#, Fei Chen#, Xingtan Zhang#, Zhen Li#, Yiyong Zhao#, Rolf Lohaus, Xiaojun Chang, et al. 2020. “The Water Lily Genome and the Early Evolution of Flowering Plants.” Nature 577 (7788): 79–84. https://doi.org/10.1038/s41586-019-1852-5. (#co-first author)

4. Zhang, J.#. Zhang X.#, Tang H#., et al. Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L. Nature Genetics, doi:10.1038/s41588-018-0237-2 (2018). (co-first author)

5. Wang, G.#, Zhang, X.#, Herre, E., McKey, D., Machado, D., Yu, W., Canno, C., Arnold, M., Pereira., R., Ming, R., Liu, Y., Wang, Y., Ma, D., Chen, J. (2021) Genomic evidence of prevalent hybridization throughout the evolutionary history of the fig-wasp pollination mutualism. Nature Communications. (Accept; #co-first author)

6. Zhang, Liwu, Yi Xu, Xingtan Zhang#, Xiaokai Ma, Lilan Zhang, Zhenyang Liao, Qing Zhang, et al. 2020. “The Genome of Kenaf (Hibiscus Cannabinus L.) Provides Insights into Bast Fibre and Leaf Shape Biogenesis.” Plant Biotechnology Journal, January, 10.1111/pbi.13341. https://doi.org/10.1111/pbi.13341. (#co-first author)

7. Zhang Xingtan, Ruoxi Wu, Yibin Wang, Jiaxin Yu, and Haibao Tang. 2019. “Unzipping Haplotypes in Diploid and Polyploid Genomes.” Computational and Structural Biotechnology Journal 18 (December): 66–72. https://doi.org/10.1016/j.csbj.2019.11.011.

8. Zhang Xingtan, Xuequn Chen, Pingping Liang, and Haibao Tang. 2018. “Cataloging Plant Genome Structural Variations.” Current Issues in Molecular Biology 27: 181–94. https://doi.org/10.21775/cimb.027.181.

9. Zhang Xingtan, Genhong Wang, Junping Gao, Mengyun Nie, Wenshan Liu, and Qingyou Xia. 2016. “Functional Analysis of NtMPK2 Uncovers Its Positive Role in Response to Pseudomonas Syringae Pv. Tomato DC3000 in Tobacco.” Plant Molecular Biology 90 (1–2): 19–31. https://doi.org/10.1007/s11103-015-0391-1.

10. Zhang Xingtan, Mengyun Nie, Qian Zhao, Yuqian Wu, Genhong Wang, and Qingyou Xia. 2015. “Genome-Wide Patterns of Genetic Variation among Silkworms.” Molecular Genetics and Genomics : MGG 290 (4): 157587. https://doi.org/10.1007/s00438-015-1017-7.

11. Zhang Xingtan, Benjamin D Rosen, Haibao Tang, Vivek Krishnakumar, and Christopher D Town. 2015. “Polyribosomal RNA-Seq Reveals the Decreased Complexity and Diversity of the Arabidopsis Translatome.” PloS One 10 (2): e0117699–e0117699. https://doi.org/10.1371/journal.pone.0117699.

12. Zhang Xingtan, Tingcai Cheng, Genhong Wang, Yafei Yan, and Qingyou Xia. 2013. “Cloning and Evolutionary Analysis of Tobacco MAPK Gene Family.” Molecular Biology Reports 40 (2): 1407–15. https://doi.org/10.1007/s11033-012-2184-9.